Intro to Globus CLI (on HPC)

This is a quick intro on how to use Globus Command Line Interface line to transfer from NCAR to MIT oceans

x_yan@dolma:~$ cd /net/flood/data/users/x_yan/cmip_data

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ module add apps/globusconnectpersonal/3.2.2

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ pip install –user globus-cli

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ echo ‘export PATH=”$HOME/.local/bin:$PATH”’ » ~/.bashrc

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ source ~/.bashrc

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ which globus

/home/x_yan/.local/bin/globus

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ globus login –no-local-server

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ globusconnectpersonal -setup

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ nohup globusconnectpersonal -start

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ globus whoami –verbose

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ export CASPER_ID=d33b3614-6d04-11e5-ba46-22000b92c6ec

export DOLMA_ID=b86736ea-463c-11f0-afdf-0affd01a5913

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ for n in {2..10}; do globus transfer
$CASPER_ID:/glade/derecho/scratch/doughert/MPAS/mem${n}
$DOLMA_ID:/net/flood/data/users/x_yan/cmip_data/mem${n}
–recursive –verify-checksum –preserve-mtime
–label “mpas_mem${n}” done The collection you are trying to access data on requires you to grant consent for the Globus CLI to access it.

Please run: xxxx

x_yan@dolma:/net/flood/data/users/x_yan/cmip_data$ for n in {2..10}; do globus transfer
$CASPER_ID:/glade/derecho/scratch/doughert/MPAS/mem${n}
$DOLMA_ID:mem${n}
–recursive –verify-checksum –preserve-mtime
–label “mpas_mem${n}” done